Plugin StructureSAFE
Semi-automated research assistant for academic research and software development. Supports Claude Code, Codex CLI, Kimi Code CLI, and OpenCode across ideation, coding, experiments, writing, and publication.
Overview
From the repository's own README, as read at the audited commit. Badges and raw HTML are left out.
Comprehensive guidance on Claude Code plugin architecture, directory layout, and best practices.
Overview
This skill provides detailed knowledge about:
- Plugin directory structure and organization
plugin.jsonmanifest configuration- Component organization (commands, agents, skills, hooks)
- Auto-discovery mechanisms
- Portable path references with
${CLAUDE_PLUGIN_ROOT} - File naming conventions
Skill Structure
SKILL.md (1,619 words)
Core skill content covering:
- Directory structure overview
- Plugin manifest (plugin.json) fields
- Component organization patterns
- ${CLAUDEPLUGINROOT} usage
- File naming conventions
- Auto-discovery mechanism
- Best practices
- Common patterns
- Troubleshooting
References
Detailed documentation for deep dives:
- manifest-reference.md: Complete
plugin.jsonfield reference - All field descriptions and examples
- Path resolution rules
- Validation guidelines
- Minimal vs. complete manifest examples
- component-patterns.md: Advanced organization patterns
- Component lifecycle (discovery, activation)
- Command organization patterns
- Agent organization patterns
- Skill organization patterns
- Hook organization patterns
- Script organization patterns
- Cross-component patterns
- Best practices for scalability
Examples
Three complete plugin examples:
- minimal-plugin.md: Simplest possible plugin
- Single command
- Minimal manifest
- When to use this pattern
- standard-plugin.md: Well-structured production plugin
- Multiple components (commands, agents, skills, hooks)
- Complete manifest with metadata
- Rich skill structure
- Integration between components
- advanced-plugin.md: Enterprise-grade plugin
- Multi-level organization
- MCP server integration
- Shared libraries
- Configuration management
- Security automation
- Monitoring integration
When This Skill Triggers
Claude Code activates this ski
29ad4d4206fbOBSERVED · 2026-10-07Host compatibility
What the documentation claims. We have not run a compatibility test.
| Host | Status | Notes |
|---|---|---|
| claude-code | mentioned |
What it tells the agent
The instruction file, verbatim from the audited commit — this is the text the model reads, and the surface the audit's instruction layer examines. Quoted here so you can judge it without cloning anything.
---
name: plugin-structure
description: This skill should be used when the user asks to "create a plugin", "scaffold a plugin", "understand plugin structure", "organize plugin components", "set up plugin.json", "use ${CLAUDE_PLUGIN_ROOT}", "add commands/agents/skills/hooks", "configure auto-discovery", or needs guidance on plugin directory layout, manifest configuration, component organization, file naming conventions, or Claude Code plugin architecture best practices.
version: 0.1.0
---
# Plugin Structure for Claude Code
## Overview
Claude Code plugins follow a standardized directory structure with automatic component discovery. Understanding this structure enables creating well-organized, maintainable plugins that integrate seamlessly with Claude Code.
**Key concepts:**
- Conventional directory layout for automatic discovery
- Manifest-driven configuration in `.claude-plugin/plugin.json`
- Component-based organization (commands, agents, skills, hooks)
- Portable path references using `${CLAUDE_PLUGIN_ROOT}`
- Explicit vs. auto-discovered component loading
## Directory Structure
Every Claude Code plugin follows this organizational pattern:
```
plugin-name/
├── .claude-plugin/
│ └── plugin.json # Required: Plugin manifest
├── commands/ # Slash commands (.md files)
├── agents/ # Subagent definitions (.md files)
├── skills/ # Agent skills (subdirectories)
│ └── skill-name/
│ └── SKILL.md # Required for each skill
├── hooks/
│ └── hooks.json # Event handler configuration
├── .mcp.json # MCP server definitions
└── scripts/ # Helper scripts and utilities
```
**Critical rules:**
1. **Manifest location**: The `plugin.json` manifest MUST be in `.claude-plugin/` directory
2. **Component locations**: All component directories (commands, agents, skills, hooks) MUST be at plugin root level, NOT nested inside `.claude-plugin/`
3. **Optional components**: Only create directories for components the plugin actually uses
4. **Naming convention**: Use kebab-case for all directory and file names
## Plugin Manifest (plugin.json)
The manifest defines plugin metadata and configuration. Located at `.claude-plugin/plugin.json`:
### Required Fields
```json
{
"name": "plugin-name"
}
```
**Name requirements:**
- Use kebab-case format (lowercase with hyphens)
- Must be unique across installed plugins
- No spaces or special characters
- Example: `code-review-assistant`, `test-runner`, `api-docs`
### Recommended Metadata
```json
{
"name": "plugin-name",
"version": "1.0.0",
"description": "Brief explanation of plugin purpose",
"author": {
"name": "Author Name",
"email": "[email protected]",
"url": "https://example.com"
},
"homepage": "https://docs.example.com",
"repository": "https://github.com/user/plugin-name",
"license": "MIT",
"keywords": ["testing", "automation", "ci-cd"]
}
```
**Version format**: Follow semantic versioning (MAJOR.MINOR.PATCH)
**Keywords**: Use for plugin discovery and categorization
### Component Path Configuration
Specify custom paths for components (supplements default directories):
```json
{
"name": "plugin-name",
"commands": "./custom-commands",
"agents": ["./agents", "./specialized-agents"],
"hooks": "./config/hooks.json",
"mcpServers": "./.mcp.json"
}
```
**Important**: Custom paths supplement defaults—they don't replace them. Components in both default directories and custom paths will load.
**Path rules:**
- Must be relative to plugin root
- Must start with `./`
- Cannot use absolute paths
- Support arrays for multiple locations
## Component Organization
### Commands
**Location**: `commands/` directory
**Format**: Markdown files with YAML frontmatter
**Auto-discovery**: All `.md` files in `commands/` load automatically
**Example structure**:
```
commands/
├── review.md # /review command
├── test.md # /test command
└── deploy.md # /deploy command
```
**File format**:
```markdown
---
name: command-name
description: Command description
---
Command implementation instructions...
```
**Usage**: Commands integrate as native slash commands in Claude Code
### Agents
**Location**: `agents/` directory
**Format**: Markdown files with YAML frontmatter
**Auto-discovery**: All `.md` files in `agents/` load automatically
**Example structure**:
```
agents/
├── code-reviewer.md
├── test-generator.md
└── refactorer.md
```
**File format**:
```markdown
---
description: Agent role and expertise
capabilities:
- Specific task 1
- Specific task 2
---
Detailed agent instructions and knowledge...
```
**Usage**: Users can invoke agents manually, or Claude Code selects them automatically based on task context
### Skills
**Location**: `skills/` directory with subdirectories per skill
**Format**: Each skill in its own directory with `SKILL.md` file
**Auto-discovery**: All `SKILL.md` files in skill subdirectories load automatically
**Example structure**:
```
skills/
├── api-testing/
│ ├── SKILL.md
│ ├── scripts/
│ │ └── test-runner.py
│ └── references/
│ └── api-spec.md
└── database-migrations/
├── SKILL.md
└── examples/
└── migration-template.sql
```
**SKILL.md format**:
```markdown
---
name: Skill Name
description: When to use this skill
version: 1.0.0
---
Skill instructions and guidance...
```
**Supporting files**: Skills can include scripts, references, examples, or assets in subdirectories
**Usage**: Claude Code autonomously activates skills based on task context matching the description
### Hooks
**Location**: `hooks/hooks.json` or inline in `plugin.json`
**Format**: JSON configuration defining event handlers
**Registration**: Hooks register automatically when plugin enables
**Example structure**:
```
hooks/
├── hooks.json # Hook configuration
└── scripts/
├── validate.sh # Hook script
└── check-style.sh # Hook script
```
Trust audit
SAFEgrade B · trust 89/100 Nothing in the source contradicts what it says it does. Grade A is reserved for packages that have also passed the behavioural sandbox.
| Layer | What it checks | Result |
|---|---|---|
| L0 | Provenance & inventory | PASS |
| L1 | Static analysis of the code | NA |
| L2 | Instruction surface (what it tells the agent) | PASS |
| L3 | Class-specific surface | PASS |
| L4 | Behavioural (sandbox) | SKIPPED |
What the source does
- Filesystem
- none-observed
- Network
- none-observed
- Shell
- none-observed
- Dependencies
- pinned
- Secrets in source
- none-found
Findings (0)
No findings outside the package's declared scope.
Gates applied: no_behavioural_pass.
29ad4d4206fbfull audit observations/trust-audit/skill/galaxy-dawn__plugin-structure.json · Report an issue / request a re-scanAudit history
Every audit this skill has had.
| Date | Source | Verdict | Grade | Score | Change |
|---|---|---|---|---|---|
| 2026-10-07 | 29ad4d4206fb | SAFE | B | 89 | first audit |
Questions
What does the Plugin Structure skill do?
Semi-automated research assistant for academic research and software development. Supports Claude Code, Codex CLI, Kimi Code CLI, and OpenCode across ideation, coding, experiments, writing, and publication.
Is Plugin Structure safe to install?
The audit found nothing in the source that contradicts what it says it does, and graded it B (89/100). Grade A is held back for packages that have also passed a sandboxed behavioural run, which is why a clean skill reads B.
What can Plugin Structure access on my machine?
The audit observed no filesystem, network or shell use at all in its source.
Which assistants does Plugin Structure work with?
Its documentation mentions claude-code. That is what the text claims, not a compatibility test we ran.
How current is this page?
The grade is for one exact copy of the source (29ad4d4206fb), read on 2026-10-07. The repository is watched, and a new audit runs when it changes — this is the first audit.