Atlas / Skills / brycewang-stanford / Numerical Methods Guide

Numerical Methods GuideSAFE

skills/brycewang-stanford/numerical-methods-guide

🔬 A curated collection of 23,000+ agent skills for empirical research across 8 social science disciplines. | 精选 23,000+ AI Agent 技能库,覆盖8大社会科学学科的实证研究。CoPaper.AI 20分钟完成一篇可复现的规范实证论文,并支持用户上传 Skills。-- Maintained by CoPaper.AI from Stanford REAP.

Verdict
SAFE
Grade
B
Trust score
89 /100
Version
—
Hosts
1 documented
License
NOASSERTION
Stars
4,537
01

Overview

🔬 A curated collection of 23,000+ agent skills for empirical research across 8 social science disciplines. | 精选 23,000+ AI Agent 技能库,覆盖8大社会科学学科的实证研究。CoPaper.AI 20分钟完成一篇可复现的规范实证论文,并支持用户上传 Skills。-- Maintained by CoPaper.AI from Stanford REAP.

Read from source at commit e1ba289846fdOBSERVED · 2026-10-08
02

Host compatibility

What the documentation claims. We have not run a compatibility test.

HostStatusNotes
openclawmentioned
03

What it tells the agent

The instruction file, verbatim from the audited commit — this is the text the model reads, and the surface the audit's instruction layer examines. Quoted here so you can judge it without cloning anything.

---
name: numerical-methods-guide
description: "Apply numerical methods and scientific computing techniques"
metadata:
  openclaw:
    emoji: "🧮"
    category: "domains"
    subcategory: "math"
    keywords: ["numerical methods", "scientific computing", "ODE solver", "optimization", "interpolation", "finite differences"]
    source: "wentor-research-plugins"
---

# Numerical Methods Guide

A skill for applying numerical methods in scientific computing and research. Covers root finding, numerical integration, ODE solvers, optimization, interpolation, and error analysis with practical implementations in Python.

## Root Finding

### Newton's Method and Alternatives

```python
import numpy as np


def newton_method(f, df, x0: float, tol: float = 1e-10,
                  max_iter: int = 100) -> dict:
    """
    Newton's method for finding roots of f(x) = 0.

    Args:
        f: Function whose root we seek
        df: Derivative of f
        x0: Initial guess
        tol: Convergence tolerance
        max_iter: Maximum iterations
    """
    x = x0
    history = [x]

    for i in range(max_iter):
        fx = f(x)
        dfx = df(x)

        if abs(dfx) < 1e-15:
            return {"root": x, "converged": False,
                    "reason": "Zero derivative encountered"}

        x_new = x - fx / dfx
        history.append(x_new)

        if abs(x_new - x) < tol:
            return {
                "root": x_new,
                "converged": True,
                "iterations": i + 1,
                "f_at_root": f(x_new),
                "convergence": "quadratic"
            }

        x = x_new

    return {"root": x, "converged": False, "reason": "Max iterations reached"}
```

### Method Selection Guide

| Method | Convergence | Requires | Robustness |
|--------|------------|----------|-----------|
| Bisection | Linear (slow) | Bracketing interval | Very robust |
| Newton | Quadratic (fast) | Derivative | May diverge |
| Secant | Superlinear (~1.62) | Two initial guesses | Moderate |
| Brent | Superlinear | Bracketing interval | Very robust |

## Numerical Integration

### Quadrature Methods

```python
from scipy import integrate


def numerical_integration_comparison(f, a: float, b: float) -> dict:
    """
    Compare numerical integration methods.

    Args:
        f: Function to integrate
        a: Lower bound
        b: Upper bound
    """
    # Adaptive Gaussian quadrature (recommended default)
    quad_result, quad_error = integrate.quad(f, a, b)

    # Simpson's rule (fixed-point)
    n_points = 101
    x = np.linspace(a, b, n_points)
    simps_result = integrate.simpson(f(x), x=x)

    # Romberg integration
    romb_result = integrate.romberg(f, a, b)

    return {
        "quad": {"value": quad_result, "error_estimate": quad_error},
        "simpson": {"value": simps_result, "n_points": n_points},
        "romberg": {"value": romb_result},
        "recommendation": (
            "Use scipy.integrate.quad for most cases. "
            "It adaptively chooses points for accuracy."
        )
    }
```

## Ordinary Differential Equations

### Solving Initial Value Problems

```python
from scipy.integrate import solve_ivp


def solve_ode_system(f, t_span: tuple, y0: list,
                     method: str = "RK45") -> dict:
    """
    Solve a system of ODEs: dy/dt = f(t, y).

    Args:
        f: Right-hand side function f(t, y)
        t_span: (t_start, t_end)
        y0: Initial conditions
        method: Solver method (RK45, RK23, Radau, BDF, LSODA)
    """
    sol = solve_ivp(
        f, t_span, y0,
        method=method,
        dense_output=True,
        rtol=1e-8,
        atol=1e-10
    )

    return {
        "success": sol.success,
        "message": sol.message,
        "t": sol.t,
        "y": sol.y,
        "n_evaluations": sol.nfev,
        "method_used": method
    }


# Example: Lorenz system (chaotic dynamics)
def lorenz(t, state, sigma=10, rho=28, beta=8/3):
    x, y, z = state
    return [
        sigma * (y - x),
        x * (rho - z) - y,
        x * y - beta * z
    ]

result = solve_ode_system(lorenz, (0, 50), [1.0, 1.0, 1.0])
```

### Solver Selection

```
Non-stiff problems:
  RK45 (default):  4th/5th order Runge-Kutta, adaptive step
  RK23:            Lower order, useful for less smooth problems
  DOP853:          High-order, excellent for smooth problems

Stiff problems:
  Radau:           Implicit Runge-Kutta, good for stiff systems
  BDF:             Backward differentiation formula (classic stiff solver)
  LSODA:           Automatically switches between non-stiff and stiff

How to tell if your problem is stiff:
  - RK45 takes many tiny steps or fails to converge
  - The system has widely separated time scales
  - Chemical kinetics, circuit simulations often stiff
```

## Optimization

### Minimization Methods

```python
from scipy.optimize import minimize


def optimize_with_comparison(f, x0: np.ndarray,
                              bounds: list = None) -> dict:
    """
    Compare optimization methods on a given objective function.

    Args:
        f: Objective function to minimize
        x0: Initial guess
        bounds: List of (min, max) tuples for each variable
    """
    results = {}

    # Gradient-free
    res_nm = minimize(f, x0, method="Nelder-Mead")
    results["Nelder-Mead"] = {"x": res_nm.x, "fun": res_nm.fun,
                               "nfev": res_nm.nfev}

    # Gradient-based (quasi-Newton)
    res_bfgs = minimize(f, x0, method="L-BFGS-B", bounds=bounds)
    results["L-BFGS-B"] = {"x": res_bfgs.x, "fun": res_bfgs.fun,
                            "nfev": res_bfgs.nfev}

    return results
```

## Error Analysis

### Sources of Numerical Error

```
1. Rounding error:
   Finite precision arithmetic (float64 has ~16 significant digits)
   Accumulates in long computations

2. Truncation error:
   Error from approximating continuous math with discrete formulas
   Example: Finite difference df/dx ~ (f(x+h) - f(x)) / h

3. Conditionin
04

Trust audit

SAFEgrade B · trust 89/100 Nothing in the source contradicts what it says it does. Grade A is reserved for packages that have also passed the behavioural sandbox.

LayerWhat it checksResult
L0Provenance & inventoryPASS
L1Static analysis of the codeNA
L2Instruction surface (what it tells the agent)PASS
L3Class-specific surfacePASS
L4Behavioural (sandbox)SKIPPED

What the source does

Filesystem
none-observed
Network
none-observed
Shell
none-observed
Dependencies
pinned
Secrets in source
none-found

Findings (0)

No findings outside the package's declared scope.

Gates applied: no_behavioural_pass.

Audited 2026-10-08 · audit v0.4.1 · source sha e1ba289846fdfull audit observations/trust-audit/skill/brycewang-stanford__numerical-methods-guide.json · Report an issue / request a re-scan
05

Audit history

Every audit this skill has had.

DateSourceVerdictGradeScoreChange
2026-10-08e1ba289846fdSAFEB89first audit
06

Questions

What does the Numerical Methods Guide skill do?

🔬 A curated collection of 23,000+ agent skills for empirical research across 8 social science disciplines. | 精选 23,000+ AI Agent 技能库,覆盖8大社会科学学科的实证研究。CoPaper.AI 20分钟完成一篇可复现的规范实证论文,并支持用户上传 Skills。-- Maintained by CoPaper.AI from Stanford REAP.

Is Numerical Methods Guide safe to install?

The audit found nothing in the source that contradicts what it says it does, and graded it B (89/100). Grade A is held back for packages that have also passed a sandboxed behavioural run, which is why a clean skill reads B.

What can Numerical Methods Guide access on my machine?

The audit observed no filesystem, network or shell use at all in its source.

Which assistants does Numerical Methods Guide work with?

Its documentation mentions openclaw. That is what the text claims, not a compatibility test we ran.

How current is this page?

The grade is for one exact copy of the source (e1ba289846fd), read on 2026-10-08. The repository is watched, and a new audit runs when it changes — this is the first audit.

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