Atlas / MCP servers / morphik-org / Morphik

MorphikSAFE

mcp/morphik-org/morphik
Verdict
SAFE
Grade
B
Trust score
89 /100
Exposed tools
17 11r · 4w · 2d
Transport
stdio · streamable-http
License
—
Stars
24
01

Overview

From the repository's own README, as read at the audited commit. Badges and raw HTML are left out.

A Model Context Protocol (MCP) server implementation for Morphik multi-modal database.

Overview

This MCP server allows Claude and other MCP-compatible AI assistants to interact with the Morphik database system, enabling:

  • Document ingestion (text and files)
  • Document retrieval (by relevance to queries)
  • Document querying with LLM-powered completions
  • Document management (listing, getting, deleting)
  • File system navigation and file ingestion from paths

The server supports two transport modes:

  • stdio (default): Standard input/output for use with Claude Desktop and other MCP clients
  • Streamable HTTPS: HTTP/HTTPS endpoint for web-based integrations

Prerequisites

You need access to either:

  • A local Morphik server running on localhost:8000, or
  • The Morphik cloud platform

Installation & Usage

Option 1: Run directly with npx (recommended)

# Connect to local Morphik server
npx morphik-mcp

# Connect to Morphik cloud platform (replace with your actual URI)
npx morphik-mcp --uri=https://api.morphik.ai

# Specify allowed directories for file operations (comma-separated)
npx morphik-mcp --allowed-dir=~/Documents,~/Downloads

Option 2: Global installation

npm install -g morphik-mcp

# Connect to local Morphik server
morphik-mcp

# Connect to Morphik cloud platform
morphik-mcp --uri=https://api.morphik.ai

# Specify allowed directories for file operations
morphik-mcp --allowed-dir=~/Documents,~/Downloads

Option 3: Local development

# Clone the repository
git clone https://github.com/morphik-org/morphik-npm-mcp.git
cd morphik-npm-mcp

# Install dependencies
npm install

# Build the project
npm run build

# Start the server (local Morphik)
npm start

# Start the server with file operations enabled
node build/index.js --allowed-dir=~/Documents,~/Downloads

The server runs on standard input/output streams by default and can be used with MCP clients like Claude.

For HTTP/HTTPS mode (st

Read from source at commit 08782efcc351OBSERVED · 2026-10-09
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02

Connect

Built from this server's own package name, version and transport as found in its source — not copied from anyone's documentation, so it cannot drift against a page we do not control.

claude-code
claude mcp add mcp -- npx -y @morphik/[email protected]
claude-desktop
{
  "mcpServers": {
    "mcp": {
      "command": "npx",
      "args": [
        "-y",
        "@morphik/[email protected]"
      ]
    }
  }
}
03

Exposed tools (17)

11 read · 4 write · 2 destructive. Blast radius: 2 tools can delete or overwrite — an agent that can be talked into calling a tool can be talked into calling this one.

ToolRiskDescription
check-ingestion-statusreadCheck processing status for a document that is being ingested or processed.
delete-documentdestructiveDelete a document and all of its derived data.
get-documentreadLookup metadata for a document by ID.
get-file-inforeadGet detailed information about a file or directory, including size, creation time, and permissions. Use this to check if a file exists and learn more about it before ingesting.
get-pages-in-rangereadRetrieve an inclusive page range (max 10 pages) from a document. Ideal for reading context around earlier chunk hits.
ingest-file-from-base64writeAdd a file to Morphik
ingest-file-from-pathwriteAdd a file to Morphik
ingest-files-from-pathswriteAdd multiple files to Morphik
ingest-textwriteAdd raw text into Morphik so it becomes searchable and available for retrieval.
list-allowed-directoriesreadGet a list of directories the MCP server is allowed to access for file operations. Use this to understand where you can browse and select files for ingestion into Morphik.
list-directoryreadList files and subdirectories in a specified directory. Results are marked as either [FILE] or [DIR]. Use this to browse file systems to find files you want to ingest into Morphik.
list-documentsreadList documents with optional metadata filters. Supports high limits, folder scoping, and returning total counts.
morphik-filtersdestructiveShow, set, or clear typed metadata filters that automatically apply to retrieval and list commands.
retrieve-chunksreadRetrieve the most relevant text or image pages for a given query. Always call this before answering knowledge-based questions.
retrieve-docsreadReturn complete documents that best match a query when you need broader context than individual chunks.
search-documentsreadSearch for documents by filename or title using full-text search. Use this to discover documents before retrieving their content.
search-filesreadSearch for files matching a pattern in a directory and its subdirectories. This is useful for finding files when you don
04

Trust audit

SAFEgrade B · trust 89/100 Nothing in the source contradicts what it says it does. Grade A is reserved for packages that have also passed the behavioural sandbox.

LayerWhat it checksResult
L0Provenance & inventoryPASS
L1Static analysis of the codePASS
L2Instruction surface (what it tells the agent)PASS
L3Class-specific surfaceWARN
L4Behavioural (sandbox)SKIPPED

What the source does

Filesystem
declared (1 observation(s))
Network
declared (2 observation(s))
Shell
none-observed
Dependencies
not all pinned
Secrets in source
none-found

Findings (3)

MEDIUMFilesystem / path · mcp.destructive_tools · CWE-22, CWE-59
delete-document, morphik-filters
Why it matters. 2 tool(s) can delete or overwrite
Fix. prefer a read-only mode or scoped tokens; the page states the blast radius
LOWInventory / provenance · inv.no_license · CWE-1104
Why it matters. no LICENSE file and no repo licence
Fix. add a licence
LOWSupply chain · supply.unpinned · CWE-829, CWE-1357
package.json
@modelcontextprotocol/sdk, @types/cors, @types/express, @types/minimatch, @types/sharp, cors, express, form-data
Why it matters. 18 dependency range(s) float
Fix. pin exact versions or ship a lockfile

Gates applied: no_behavioural_pass, no_license.

Audited 2026-10-09 · audit v0.4.1 · source sha 08782efcc351full audit observations/trust-audit/mcp-server/morphik-org__morphik.json · Report an issue / request a re-scan
05

Audit history

Every audit this server has had. A grade with a past is a grade somebody is still checking.

DateSourceVerdictGradeScoreChange
2026-10-0908782efcc351SAFEB89first audit
06

Questions

What tools does Morphik expose?

17 in total: 11 read-only, 4 that write, and 2 that can delete or overwrite (delete-document, morphik-filters). Every one is listed on this page with its risk.

Is Morphik safe to connect to an agent?

The audit found nothing in the source that contradicts what it says it does, and graded it B (89/100). Grade A is held back for packages that have also passed a sandboxed behavioural run, which is why a clean server reads B. Separately from the audit: 2 of its tools can destroy data, so scope the token you give it to what you actually need.

What credentials does Morphik need?

No credential environment variables were found in its source, so it appears to need none.

How does Morphik run?

It speaks stdio and streamable-http, so it runs as a local process your client starts. It is published on npm as @morphik/mcp at 1.0.13.

How current is this page?

The grade is for one exact copy of the source (08782efcc351), read on 2026-10-09. The repository is watched and re-audited when it changes.

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