Atlas / MCP servers / fosdickio / Binary Ninja

Binary NinjaCAUTION

mcp/fosdickio/binary-ninja

A Binary Ninja plugin containing an MCP server that enables seamless integration with your favorite LLM/MCP client.

Verdict
CAUTION
Grade
B
Trust score
89 /100
Exposed tools
56 45r · 9w · 2d
Transport
stdio
License
GPL-3.0
Stars
445
01

Overview

From the repository's own README, as read at the audited commit. Badges and raw HTML are left out.

This repository contains a Binary Ninja plugin, MCP server, and bridge that enables seamless integration of Binary Ninja's capabilities with your favorite LLM client.

Features

  • Seamless, real-time integration between Binary Ninja and MCP clients
  • Enhanced reverse engineering workflow with AI assistance
  • Support for every MCP client (Cline, Claude desktop, Roo Code, etc.)
  • Open multiple binaries and switch the active target automatically

Examples

Solving a CTF Challenge

Check out this demo video on YouTube that uses the extension to solve a CTF challenge.

Components

This repository contains two separate components:

  1. A Binary Ninja plugin that provides an MCP server that exposes Binary Ninja's capabilities through HTTP endpoints. This can be used with any client that implements the MCP protocol.
  2. A separate MCP bridge component that connects your favorite MCP client to the Binary Ninja MCP server.

Prerequisites

  • Binary Ninja
  • Python 3.12+
  • MCP client (those with auto-setup support are listed below)

Installation

MCP Client

Please install the MCP client before you install Binary Ninja MCP so that the MCP clients can be auto-setup. We currently support auto-setup for these MCP clients:

  1. Cline (recommended)
  2. Roo Code
  3. Claude Desktop (recommended)
  4. Cursor
  5. Windsurf
  6. Claude Code
  7. LM Studio

Extension Installation

After the MCP client is installed, you can install the MCP server using the Binary Ninja Plugin Manager or manually. Both methods support auto-setup of MCP clients.

If your MCP client is not set, you should install it first then try to reinstall the extension.

Binary Ninja Plugin Manager

You may install the extension through Binary Ninja's Plugin Manager (Plugins > Manage Plugins).

![Plugin Manager](images/plugin-manager-l

Read from source at commit c8a61b46299aOBSERVED · 2026-10-01
02

Connect

Built from this server's own package name, version and transport as found in its source — not copied from anyone's documentation, so it cannot drift against a page we do not control.

claude-code
claude mcp add binary-ninja-mcp -- npx -y [email protected]
claude-desktop
{
  "mcpServers": {
    "binary-ninja-mcp": {
      "command": "npx",
      "args": [
        "-y",
        "[email protected]"
      ]
    }
  }
}
03

Exposed tools (56)

45 read · 9 write · 2 destructive. Blast radius: 2 tools can delete or overwrite — an agent that can be talked into calling a tool can be talked into calling this one.

ToolRiskDescription
convert_numberread
declare_c_typeread
decompile_functionread
define_typesread
delete_commentdestructive
delete_function_commentdestructive
fetch_disassemblyread
format_valueread
function_atread
get_binary_statusread
get_calleesread
get_callersread
get_commentread
get_data_declread
get_entry_pointsread
get_function_commentread
get_ilread
get_stack_frame_varsread
get_type_inforead
get_user_defined_typeread
get_xrefs_toread
get_xrefs_to_enumread
get_xrefs_to_fieldread
get_xrefs_to_structread
get_xrefs_to_typeread
get_xrefs_to_unionread
hexdump_addressread
hexdump_dataread
list_all_stringsread
list_binariesread
list_classesread
list_data_itemsread
list_exportsread
list_importsread
list_local_typesread
list_methodsread
list_namespacesread
list_platformsread
list_sectionsread
list_segmentsread
list_stringsread
list_strings_filterread
make_function_atread
patch_byteswrite
rename_datawrite
rename_functionwrite
rename_multi_variableswrite
rename_single_variablewrite
retype_variableread
search_functions_by_nameread
search_typesread
select_binaryread
set_commentwrite
set_function_commentwrite
set_function_prototypewrite
set_local_variable_typewrite
04

Trust audit

CAUTIONgrade B · trust 89/100 Install with care. The audit found things worth knowing before you trust its output.

LayerWhat it checksResult
L0Provenance & inventoryPASS
L1Static analysis of the codeWARN
L2Instruction surface (what it tells the agent)PASS
L3Class-specific surfaceWARN
L4Behavioural (sandbox)SKIPPED

What the source does

Filesystem
declared (5 observation(s))
Network
declared (5 observation(s))
Shell
none-observed
Dependencies
not all pinned
Secrets in source
none-found

Findings (11)

MEDIUMFilesystem / path · fs.system_paths · CWE-22, CWE-59
plugin/utils/python_detection.py:20
return ["/opt/homebrew/bin/python3", "/usr/local/bin/python3", "/usr/bin/python3"]
MEDIUMFilesystem / path · fs.system_paths · CWE-22, CWE-59
plugin/utils/python_detection.py:22
return ["/usr/bin/python3", "/usr/local/bin/python3"]
MEDIUMFilesystem / path · fs.system_paths · CWE-22, CWE-59
scripts/setup_claude_desktop.py:69
"/usr/local/bin/python3",
MEDIUMFilesystem / path · mcp.destructive_tools · CWE-22, CWE-59
delete_comment, delete_function_comment
Why it matters. 2 tool(s) can delete or overwrite
Fix. prefer a read-only mode or scoped tokens; the page states the blast radius
LOWInventory / provenance · inv.binary · CWE-1104
example/chal
chal
Why it matters. a compiled or binary member cannot be reviewed from source
Fix. ship source, or explain the binary in the README
LOWObfuscation / stealth · obf.decode_call · CWE-506, CWE-94
plugin/core/binary_operations.py:3629
patch_bytes = bytes.fromhex(data_str)
LOWSupply chain · supply.unpinned · CWE-829, CWE-1357
bridge/package.json
@modelcontextprotocol/sdk, axios, zod, @types/node, tsx, typescript
Why it matters. 6 dependency range(s) float
Fix. pin exact versions or ship a lockfile
LOWSupply chain · supply.unpinned · CWE-829, CWE-1357
bridge/requirements.txt
anthropic, mcp, requests
Why it matters. 3 requirement(s) not pinned with ==
Fix. pin exact versions
LOWPrompt injection · prompt.authority_framing · CWE-94, CWE-1427
bridge/README.md:8
- **50+ Tools**: Full access to Binary Ninja's reverse engineering capabilities
INFOInventory / provenance · inv.oversize · CWE-1104
images/mcp-demo-rename.gif
images/mcp-demo-rename.gif
Why it matters. 24553384 bytes not read
INFOInventory / provenance · inv.oversize · CWE-1104
images/mcp-demo-report.png
images/mcp-demo-report.png
Why it matters. 1185390 bytes not read

Gates applied: no_behavioural_pass.

Audited 2026-10-01 · audit v0.4.1 · source sha c8a61b46299afull audit observations/trust-audit/mcp-server/fosdickio__binary-ninja.json · Report an issue / request a re-scan
05

Audit history

Every audit this server has had. A grade with a past is a grade somebody is still checking.

DateSourceVerdictGradeScoreChange
2026-10-01c8a61b46299aCAUTIONB89first audit
06

Questions

What is the Binary Ninja MCP server?

A Binary Ninja plugin containing an MCP server that enables seamless integration with your favorite LLM/MCP client.

What tools does Binary Ninja expose?

56 in total: 45 read-only, 9 that write, and 2 that can delete or overwrite (delete_comment, delete_function_comment). Every one is listed on this page with its risk.

Is Binary Ninja safe to connect to an agent?

With care. The audit graded it B (89/100) and found 11 things worth knowing before you trust this server, listed below with the exact line each was found on. Separately from the audit: 2 of its tools can destroy data, so scope the token you give it to what you actually need.

What credentials does Binary Ninja need?

No credential environment variables were found in its source, so it appears to need none.

How does Binary Ninja run?

It speaks stdio, so it runs as a local process your client starts. It is published on npm as binary-ninja-mcp at 1.0.0.

How current is this page?

The grade is for one exact copy of the source (c8a61b46299a), read on 2026-10-01. The repository is watched and re-audited when it changes.

Advertisement